wham command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

wham: command not found

or when using sudo you get the following error message

sudo: wham: command not found

Solutions to wham: command not found

How To Fix wham: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu wham is provided by wham-align package.

wham-align is:

This package provides functionality analogous to BWA or bowtie in aligning reads from next-generation DNA sequencing machines against a reference genome.

To fix this problem, we can install more using the command below.

sudo apt-get -y install wham-align

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install wham-align.

sudo apt -y install wham-align

Or if you have aptitude installed you can use the following command.

sudo aptitude install wham-align

Summary

In this tutorial we learn how to fix wham command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.