umis command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

umis: command not found

or when using sudo you get the following error message

sudo: umis: command not found

Solutions to umis: command not found

How To Fix umis: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu umis is provided by umis package.

umis is:

Umis provides tools for estimating expression in RNA-Seq data which performs sequencing of end tags of transcript, and incorporate molecular tags to correct for amplification bias.

There are four steps in this process.

1. Formatting reads
2. Filtering noisy cellular barcodes
3. Pseudo-mapping to cDNAs
4. Counting molecular identifiers

To fix this problem, we can install more using the command below.

sudo apt-get -y install umis

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install umis.

sudo apt -y install umis

Or if you have aptitude installed you can use the following command.

sudo aptitude install umis

Summary

In this tutorial we learn how to fix umis command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.