squizz command not found

In this troubleshooting guide we learn how to fix squizz command not found error message

Introduction

When you run more command in linux terminal / console, you get the following error message

squizz: command not found

or when using sudo you get the following error message

sudo: squizz: command not found

Solutions to squizz: command not found

How To Fix squizz: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu squizz is provided by squizz package.

squizz is:

Squizz is a sequence/alignment format checker, but it has some conversion capabilities too. Most common sequence and alignment formats are supported :

  • EMBL, FASTA, GCG, GDE, GENBANK, IG, NBRF, PIR (codata), RAW, and SWISSPROT.
  • CLUSTAL, FASTA, MEGA, MSF, NEXUS, PHYLIP (interleaved and sequential) and STOCKHOLM.

To fix this problem, we can install more using the command below.

sudo apt-get -y install squizz

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install squizz.

sudo apt -y install squizz

Or if you have aptitude installed you can use the following command.

sudo aptitude install squizz

Summary

In this tutorial we learn how to fix squizz command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.