qcumber command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

qcumber: command not found

or when using sudo you get the following error message

sudo: qcumber: command not found

Solutions to qcumber: command not found

How To Fix qcumber: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu qcumber is provided by qcumber package.

qcumber is:

QCPipeline is a tool for quality control. The workflow is as follows:

1. Quality control with FastQC
2. Trim Reads with Trimmomatic
3. Quality control of trimmed reads with FastQC
4. Map reads against reference using bowtie2
5. Classify reads with Kraken

To fix this problem, we can install more using the command below.

sudo apt-get -y install qcumber

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install qcumber.

sudo apt -y install qcumber

Or if you have aptitude installed you can use the following command.

sudo aptitude install qcumber

Summary

In this tutorial we learn how to fix qcumber command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.