phybin command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

phybin: command not found

or when using sudo you get the following error message

sudo: phybin: command not found

Solutions to phybin: command not found

How To Fix phybin: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu phybin is provided by phybin package.

phybin is:

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

To fix this problem, we can install more using the command below.

sudo apt-get -y install phybin

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install phybin.

sudo apt -y install phybin

Or if you have aptitude installed you can use the following command.

sudo aptitude install phybin

Summary

In this tutorial we learn how to fix phybin command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.