kissplice command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

kissplice: command not found

or when using sudo you get the following error message

sudo: kissplice: command not found

Solutions to kissplice: command not found

How To Fix kissplice: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu kissplice is provided by kissplice package.

kissplice is:

KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.

To fix this problem, we can install more using the command below.

sudo apt-get -y install kissplice

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install kissplice.

sudo apt -y install kissplice

Or if you have aptitude installed you can use the following command.

sudo aptitude install kissplice

Summary

In this tutorial we learn how to fix kissplice command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.