dpe command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

dpe: command not found

or when using sudo you get the following error message

sudo: dpe: command not found

Solutions to dpe: command not found

How To Fix dpe: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu dpe is provided by delly package.

delly is:

Delly performs Structural variant discovery by integrated paired-end and split-read analysis. It discovers, genotypes and visualizes deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome.

To fix this problem, we can install more using the command below.

sudo apt-get -y install delly

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install delly.

sudo apt -y install delly

Or if you have aptitude installed you can use the following command.

sudo aptitude install delly

Summary

In this tutorial we learn how to fix dpe command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.