circlator command not found

In this troubleshooting guide we learn how to fix circlator command not found error message

Introduction

When you run more command in linux terminal / console, you get the following error message

circlator: command not found

or when using sudo you get the following error message

sudo: circlator: command not found

Solutions to circlator: command not found

How To Fix circlator: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu circlator is provided by circlator package.

circlator is:

Circlator is a tool to automate assembly circularization for bacterial and small eukaryotic genomes and produce accurate linear representations of circular sequences.

To fix this problem, we can install more using the command below.

sudo apt-get -y install circlator

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install circlator.

sudo apt -y install circlator

Or if you have aptitude installed you can use the following command.

sudo aptitude install circlator

Summary

In this tutorial we learn how to fix circlator command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.