run-sepp.sh command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

run-sepp.sh: command not found

or when using sudo you get the following error message

sudo: run-sepp.sh: command not found

Solutions to run-sepp.sh: command not found

How To Fix run-sepp.sh: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu run-sepp.sh is provided by sepp package.

sepp is:

The tool SEPP implementing these methods uses ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem.

SEPP stands for “SATe-enabled Phylogenetic Placement”, and addresses the problem of phylogenetic placement of short reads into reference alignments and trees.

To fix this problem, we can install more using the command below.

sudo apt-get -y install sepp

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install sepp.

sudo apt -y install sepp

Or if you have aptitude installed you can use the following command.

sudo aptitude install sepp

Summary

In this tutorial we learn how to fix run-sepp.sh command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.