rate4site_doublerep command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

rate4site_doublerep: command not found

or when using sudo you get the following error message

sudo: rate4site_doublerep: command not found

Solutions to rate4site_doublerep: command not found

How To Fix rate4site_doublerep: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu rate4site_doublerep is provided by rate4site package.

rate4site is:

Rate4Site calculates the relative evolutionary rate at each site using a probabilistic-based evolutionary model. This allows taking into account the stochastic process underlying sequence evolution within protein families and the phylogenetic tree of the proteins in the family. The conservation score at a site corresponds to the site’s evolutionary rate.

To fix this problem, we can install more using the command below.

sudo apt-get -y install rate4site

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install rate4site.

sudo apt -y install rate4site

Or if you have aptitude installed you can use the following command.

sudo aptitude install rate4site

Summary

In this tutorial we learn how to fix rate4site_doublerep command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.