garli-mpi command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

garli-mpi: command not found

or when using sudo you get the following error message

sudo: garli-mpi: command not found

Solutions to garli-mpi: command not found

How To Fix garli-mpi: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu garli-mpi is provided by garli-mpi package.

garli-mpi is:

GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for inferring phylogenetic trees. Using an approach similar to a classical genetic algorithm, it rapidly searches the space of evolutionary trees and model parameters to find the solution maximizing the likelihood score. It implements nucleotide, amino acid and codon-based models of sequence evolution, and runs on all platforms. The latest version adds support for partitioned models and morphology-like datatypes.

This version of Garli is using MPI.

To fix this problem, we can install more using the command below.

sudo apt-get -y install garli-mpi

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install garli-mpi.

sudo apt -y install garli-mpi

Or if you have aptitude installed you can use the following command.

sudo aptitude install garli-mpi

Summary

In this tutorial we learn how to fix garli-mpi command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.