ChromImpute command not found

Introduction

When you run more command in linux terminal / console, you get the following error message

ChromImpute: command not found

or when using sudo you get the following error message

sudo: ChromImpute: command not found

Solutions to ChromImpute: command not found

How To Fix ChromImpute: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu ChromImpute is provided by chromimpute package.

chromimpute is:

ChromImpute takes an existing compendium of epigenomic data and uses it to predict signal tracks for mark-sample combinations not experimentally mapped or to generate a potentially more robust version of data sets that have been mapped experimentally. ChromImpute bases its predictions on features from signal tracks of other marks that have been mapped in the target sample and the target mark in other samples with these features combined using an ensemble of regression trees.

To fix this problem, we can install more using the command below.

sudo apt-get -y install chromimpute

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install chromimpute.

sudo apt -y install chromimpute

Or if you have aptitude installed you can use the following command.

sudo aptitude install chromimpute

Summary

In this tutorial we learn how to fix ChromImpute command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.