Assemblytics command not found

In this troubleshooting guide we learn how to fix Assemblytics command not found error message

Introduction

When you run more command in linux terminal / console, you get the following error message

Assemblytics: command not found

or when using sudo you get the following error message

sudo: Assemblytics: command not found

Solutions to Assemblytics: command not found

How To Fix Assemblytics: command not found in Ubuntu / Debian / Kali Linux / Raspbian

In Ubuntu Assemblytics is provided by assemblytics package.

assemblytics is:

Assemblytics incorporates a unique anchor filtering approach to increase robustness to repetitive elements, and identifies six classes of variants based on their distinct alignment signatures. Assemblytics can be applied both to comparing aberrant genomes, such as human cancers, to a reference, or to identify differences between related species.

To fix this problem, we can install more using the command below.

sudo apt-get -y install assemblytics

This command might take some time to finish depending on your machine internet connection.

You can also use apt command to install assemblytics.

sudo apt -y install assemblytics

Or if you have aptitude installed you can use the following command.

sudo aptitude install assemblytics

Summary

In this tutorial we learn how to fix Assemblytics command not found error in Ubuntu / Debian / Kali Linux or Raspbian distribution.